SubtiBank SubtiBank
lplC [2018-05-04 19:26:06]
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lplC [2018-05-04 19:26:06]

transmembrane lipoprotein, putative ABC transporter (membrane protein)
locus
BSU07120
pI
9.51
mw
32.68 kDa
protein length
295 aa Sequence Blast
gene length
885 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.4|Unknown ABC transporters]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    782,062 → 782,949

    The protein

    Protein family

  • ABC transmembrane type-1 domain (according to Swiss-Prot)

    • Structure

  • [PDB|4TQU] (from Sphingomonas sp., 33% identity) [pubmed|26235029]

    • [SW|Localization]

  • cell membrane [Pubmed|10092453]

    • Biological materials

    Mutant

  • BKE07120 (Δ[gene|0A7FF3E2747598AE0EE39183E8827879C4B11A80|lplC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTTCAGCCATACCTCTCC, downstream forward: _UP4_TCGGTGAAAGGCTGAGAAAG
  • BKK07120 (Δ[gene|0A7FF3E2747598AE0EE39183E8827879C4B11A80|lplC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07120 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTTCAGCCATACCTCTCC, downstream forward: _UP4_TCGGTGAAAGGCTGAGAAAG

    • References

  • 10092453,26235029